Monday, June 26, 2017

BacterioFiles 299 - Predator Pops Polymer Producers

Bdellovibrio attacking prey
Iebba et al., Front Microbiol 2014
This episode: Using predatory bacteria to extract valuable bioplastics from other bacteria!

Download Episode (6.3 MB, 6.9 minutes)

Show notes:
News item

Journal Paper:
Martínez V, Herencias C, Jurkevitch E, Prieto MA. 2016. Engineering a predatory bacterium as a proficient killer agent for intracellular bio-products recovery: The case of the polyhydroxyalkanoates. Sci Rep 6:24381.

Other interesting stories:
  • Phages could treat infections serious in cystic fibrosis
  • Microbes help protect plants against virus infection (paper)
  • Getting closer to fecal transplant in pill form
  • Microbe communities in overused land recover as vegetation is restored
  • Deep sea phage makes a DNA polymerase that doesn't need primers (paper)

  • Post questions or comments here or email to bacteriofiles@gmail.com. Thanks for listening!

    Subscribe: iTunes, RSS, Google Play. Support the show at Patreon, or check out the show at Twitter or Facebook.

    Monday, June 19, 2017

    BacterioFiles 298 - Bacteria Boost Bone Buildup

    Human skeleton
    This episode: Gut microbes can even affect formation/remodeling of bones!

    Download Episode (8.5 MB, 9.3 minutes)

    Show notes:
    Journal Paper:
    Yan J, Herzog JW, Tsang K, Brennan CA, Bower MA, Garrett WS, Sartor BR, Aliprantis AO, Charles JF. 2016. Gut microbiota induce IGF-1 and promote bone formation and growth. Proc Natl Acad Sci 113:E7554–E7563.

    Other interesting stories:
  • Raindrops can spread soil bacteria around everywhere
  • Lots to learn from studying sauerkraut (paywall)
  • Only some bacteria in a colony do all the expanding and multiplying (paper)
  • Phage genes help Wolbachia prevent host insects from interbreeding with uninfected hosts (paper)
  • Probiotic bacteria could help prevent damage from heavy metals (paper)

  • Post questions or comments here or email to bacteriofiles@gmail.com. Thanks for listening!

    Subscribe: iTunes, RSS, Google Play. Support the show at Patreon, or check out the show at Twitter or Facebook.

    Monday, June 12, 2017

    BacterioFiles 297 - Defenders Develop Disease Decrease

    C. elegans roundworm
    By Bob Goldstein, CC BY-SA 3.0
    This episode: Beneficial microbes defend roundworms against a pathogen and pressure it to evolve to cause less disease!

    Download Episode (7.7 MB, 8.4 minutes)

    Show notes:
    News item

    Journal Paper:
    Ford SA, Kao D, Williams D, King KC. 2016. Microbe-mediated host defence drives the evolution of reduced pathogen virulence. Nat Commun 7:13430.

    Other interesting stories:
  • Fungus eats dead insects and keeps bacterial competitors away (paper)
  • Soil microbes are better for green roof soils than chemical fertilizers
  • Soil microbes make tuberculosis-treating chemicals
  • Parkinson's and treatments can have detectable effects on microbiome
  • Aspergillus fungi have a lot of potential uses

  • Post questions or comments here or email to bacteriofiles@gmail.com. Thanks for listening!

    Subscribe: iTunes, RSS, Google Play. Support the show at Patreon, or check out the show at Twitter or Facebook.

    Monday, June 5, 2017

    BacterioFiles 296 - Predator Permits Pathogen Penetration

    Cyclopoid copepod
    This episode: Tiny crustaceans eat paramecia, allowing viruses to infect algae inside them!

    Download Episode (9.1 MB, 9.9 minutes)

    Show notes:
    Follow-up to episode 259: mass-producing worm spit healing protein

    News item

    Journal Paper:
    DeLong JP, Al-Ameeli Z, Duncan G, Etten JLV, Dunigan DD. 2016. Predators catalyze an increase in chloroviruses by foraging on the symbiotic hosts of zoochlorellae. Proc Natl Acad Sci 113:13780–13784.

    Other interesting stories:
  • Microbes are important for protecting bees
  • Ant bacteria produce potential new antibiotics
  • Old microbes discovered living in mine crystals
  • Skin bacteria could protect against pathogens
  • Author is writing poems in a bacterial genome so they survive the apocalypse (paywall)

  • Post questions or comments here or email to bacteriofiles@gmail.com. Thanks for listening!

    Subscribe: iTunes, RSS, Google Play. Support the show at Patreon, or check out the show at Twitter or Facebook.

    Monday, May 29, 2017

    BacterioFiles 295 - Fly Ferries Fungus Feebleness

    Lycoriella fly
    By Kai Heller, CC BY 3.0
    This episode: Fungus-eating flies transfer viruses that help make fungi less harmful to plants!

    Download Episode (7.8 MB, 8.5 minutes)

    Show notes:
    Another example of viruses doing weird things in this fungus

    Journal Paper:
    Liu S, Xie J, Cheng J, Li B, Chen T, Fu Y, Li G, Wang M, Jin H, Wan H, Jiang D. 2016. Fungal DNA virus infects a mycophagous insect and utilizes it as a transmission vector. Proc Natl Acad Sci 113:12803–12808.

    Other interesting stories:
  • Iron-containing molecules can help various bacteria generate electricity
  • Exercise lifestyle can affect gut community (paper)
  • New discovery of plastic-degrading microbe enzymes
  • Controlling bacterial metabolism dynamically
  • Bacteria in bats could be good at fighting fungal pathogens (paper)

  • Post questions or comments here or email to bacteriofiles@gmail.com. Thanks for listening!

    Subscribe: iTunes, RSS, Google Play. Support the show at Patreon, or check out the show at Twitter or Facebook.

    Monday, May 22, 2017

    BacterioFiles 294 - Bacteria Benefit Bad Burns

    Lactobacillus plantarum colonies
    Donald Breakwell et al. 2007. 
    This episode: Probiotic bacteria prevent deadly infections in mice with serious burns!

    Download Episode (6.3 MB, 6.92 minutes)

    Show notes:
    Journal Paper:
    Argenta A, Satish L, Gallo P, Liu F, Kathju S. 2016. Local Application of Probiotic Bacteria Prophylaxes against Sepsis and Death Resulting from Burn Wound Infection. PLOS ONE 11:e0165294.

    Other interesting stories:
  • Bacteria can help cotton plants tolerate salt (paper)
  • Fiber stops microbes from eating protective gut mucus
  • Potential new antibiotics predicted and discovered in human microbes
  • Bacteria communicate to work together against viruses
  • Root bacteria help protect plants against arsenic and infections

  • Post questions or comments here or email to bacteriofiles@gmail.com. Thanks for listening!

    Subscribe: iTunes, RSS, Google Play. Support the show at Patreon, or check out the show at Twitter or Facebook.

    Monday, May 15, 2017

    BacterioFiles 293 - Millet Microbe Makes Meshes

    Finger millet
    This episode: Bacteria in finger millet roots create special killing traps for damaging fungi!

    Download Episode (7.5 MB, 8.25 minutes)

    Show notes:
    News item

    Journal Paper:
    Mousa WK, Shearer C, Limay-Rios V, Ettinger CL, Eisen JA, Raizada MN. 2016. Root-hair endophyte stacking in finger millet creates a physicochemical barrier to trap the fungal pathogen Fusarium graminearum. Nat Microbiol 1:16167.

    Other interesting stories:
  • Animal study of phage cocktail to treat cholera
  • Soil microbes could help clean up arsenic contamination (paper)
  • Bacteria with nucleus-like structure even have nuclear pore-like structures
  • Using bacteria to find best enzymes for degrading lignin (paper)
  • Making microbial fuel cells with paper

  • Post questions or comments here or email to bacteriofiles@gmail.com. Thanks for listening!

    Subscribe: iTunes, RSS, Google Play. Support the show at Patreon, or check out the show at Twitter or Facebook.