Monday, September 12, 2016

BacterioFiles 267 - Crust Color Cooks Communities

Used with permission
Biocrusts in Moab, Utah
Credit: Estelle Couradeau
This episode: Cyanobacteria in biocrusts produce pigments that heat their surroundings up to 10 degrees hotter!
Download Episode (7 MB, 7.6 minutes)

Show notes:
News item

Journal Paper:
Couradeau E, Karaoz U, Lim HC, Nunes da Rocha U, Northen T, Brodie E, Garcia-Pichel F. 2016. Bacteria increase arid-land soil surface temperature through the production of sunscreens. Nat Commun 7:10373.

Other interesting stories:
  • Engineering better bioplastic production from bacteria
  • Groups of bacteria can show a kind of memory
  • Bacteria in gut are competing and killing each other a lot
  • Exercise helps mice gut health, regardless of weight (paper)
  • Bacteria help insects tolerate cabbage toxin

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    Monday, September 5, 2016

    BacterioFiles 266 - Solar Cyborg Cells Capture Carbon

    From: Jiang, B., Henstra, A.M., Paulo, P.L., Balk, M., Van Doesburg, W., and Stams, A.J.M. (2009) Atypical one-carbon metabolism of an acetogenic and hydrogenogenic Moorella thermoacetica strain. Archives of Microbiology 191: 123-131.
    Cells of Moorella thermoacetica
    forming spores in culture
    This episode: Adding exotic elements to convert spore-forming bacteria into light-capturing cyborgs that convert carbon dioxide into useful chemicals!
    Download Episode (9.7 MB, 10.5 minutes)

    Show notes:
    News item 1/News item 2

    Journal Paper:
    Sakimoto KK, Wong AB, Yang P. 2016. Self-photosensitization of nonphotosynthetic bacteria for solar-to-chemical production. Science 351:74–77.

    Other interesting stories:
  • Unusual archaeal virus sorta looks like Ebola (paper)
  • Understanding how probiotics could prevent cancer in mice (paper)
  • Giant viruses have immune system against virophages
  • Using evolution to help yeast produce more ethanol from biomass (paper)
  • Remnants of viruses in our DNA helps us fight off infections

  • Post questions or comments here or email to bacteriofiles@gmail.com. Thanks for listening!

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    Monday, August 29, 2016

    BacterioFiles 265 - Predator Protein Protects Predator

    By flickr user AJC1 - CC BY-NC-SA 2.0, https://www.flickr.com/photos/ajc1/4187842186
    Bdellovibrio bacteriovorus
    attacking prey bacterium
    This episode: Predatory bacteria have a particular protein that protects them from their own prey-damaging enzymes!
    Download Episode (7.3 MB, 7.9 minutes)

    Show notes:
    News item

    Journal Paper:
    Lambert C, Cadby IT, Till R, Bui NK, Lerner TR, Hughes WS, Lee DJ, Alderwick LJ, Vollmer W, Sockett RE, Lovering AL. 2015. Ankyrin-mediated self-protection during cell invasion by the bacterial predator Bdellovibrio bacteriovorus. Nat Commun 6:8884.

    Other interesting stories:
  • Bacterial proteins could be used to break open cells upon command
  • Animal gut fungi could break down plant material for biofuels
  • Fungal partners help determine which trees can grow in a forest
  • Parasitic fungi contribute to ocean algae turnover (paper)
  • Fungus in tree inhibits other fungi and plants (paper)

  • Post questions or comments here or email to bacteriofiles@gmail.com. Thanks for listening!

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    Monday, August 22, 2016

    BacterioFiles 264 - Small Cells Stimulate Satiety

    This episode: Proteins from gut bacteria seems to affect hunger and satiety in their (rodent) hosts!
    Download Episode (7.7 MB, 8.3 minutes)

    Show notes:
    News item 1/News item 2

    Journal Paper:
    Breton J, Tennoune N, Lucas N, Francois M, Legrand R, Jacquemot J, Goichon A, Guérin C, Peltier J, Pestel-Caron M, Chan P, Vaudry D, do Rego J-C, Liénard F, Pénicaud L, Fioramonti X, Ebenezer IS, Hökfelt T, Déchelotte P, Fetissov SO. 2016. Gut Commensal E. coli Proteins Activate Host Satiety Pathways following Nutrient-Induced Bacterial Growth. Cell Metab 23:324–334.

    Other interesting stories:
  • Now even bacteria could make opiates
  • Soil bacteria slime could help make wound dressings
  • CRISPRs targeting phage RNA instead of DNA can have some benefits for cells
  • Engineering biotech pathways for better processes
  • Bacteria can produce antimicrobial silver nanoparticles (paper)

  • Post questions or comments here or email to bacteriofiles@gmail.com. Thanks for listening!

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    Monday, August 15, 2016

    BacterioFiles 263 - Germ Jettisoned Jellyfish Genes

    This episode: Microscopic parasites of fish and worms actually came from jellyfish-like animals, after losing most of their genome!
    Download Episode (7.7 MB, 8.3 minutes)

    Show notes:
    News item

    Journal Paper:
    Chang ES, Neuhof M, Rubinstein ND, Diamant A, Philippe H, Huchon D, Cartwright P. 2015. Genomic insights into the evolutionary origin of Myxozoa within Cnidaria. Proc Natl Acad Sci 112:14912–14917.

    Other interesting stories:
  • Deodorant use affects armpit microbes
  • Mammals like dolphins have ocean-influenced microbe communities (paper)
  • Relatively few bacteria may have immune systems (paper)
  • Diatoms are attracted to silica minerals
  • Interesting interactions with bear microbes and hibernation

  • Post questions or comments here or email to bacteriofiles@gmail.com. Thanks for listening!

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    Monday, August 8, 2016

    BacterioFiles 262 - Pathogen Polyketide Protects and Punishes

    This episode: Clostridium bacteria that infect potatoes can both kill competitors and tolerate oxygen, thanks to the pink compounds they produce!
    Download Episode (12.4 MB, 13.5 minutes)

    Show notes:
    Journal Paper:
    Shabuer G, Ishida K, Pidot SJ, Roth M, Dahse H-M, Hertweck C. 2015. Plant pathogenic anaerobic bacteria use aromatic polyketides to access aerobic territory. Science 350:670–674.

    Other interesting stories:
  • Soil bacteria protect themselves from amoeba with chemical defense (paper)
  • Understanding how probiotics could help fight rotavirus infection (paper)
  • Bacteria help defend ants from fungi (paper)
  • Modifying useful biofuel yeast with CRISPRs
  • Fungi could make useful adhesives (paper)

  • Post questions or comments here or email to bacteriofiles@gmail.com. Thanks for listening!

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    Monday, August 1, 2016

    BacterioFiles 261 - Pilfered Parasitoid Proteins Protect Prey

    These butterflies thus constitute in fact naturally produced GMOs (Genetically Modified Organisms) during the course of evolution. This is symbolised here in an Andy Warhol-like style by the fluorescent colours on the Monarch pictures.
    © IRBI-CNRS, Corentin Drezen
    This episode: Viruses domesticated by parasitoid wasps have transferred wasp genes to caterpillar victims, allowing them to survive deadly infections from other viruses! This means that Monarch butterflies are effectively naturally Genetically Modified Organisms (GMOs).
    Download Episode (13.8 MB, 15 minutes)

    Show notes:
    News item

    Journal Paper:
    Gasmi L, Boulain H, Gauthier J, Hua-Van A, Musset K, Jakubowska AK, Aury J-M, Volkoff A-N, Huguet E, Herrero S, Drezen J-M. 2015. Recurrent Domestication by Lepidoptera of Genes from Their Parasites Mediated by Bracoviruses. PLOS Genet 11:e1005470.

    Other interesting stories:

  • Similar math can describe electrons flowing and bacteria swimming
  • Natural plant bacteria can control corn pathogen (paper)
  • CO2 in oceans makes them acidic, bacteria less able to recycle dead material
  • Making wood better for biofuel affects community of plant microbes
  • A place on Earth where even microbes might not live

  • Post questions or comments here or email to bacteriofiles@gmail.com. Thanks for listening!

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